Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_4183753_4184542_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4183753 - 4184542

Intron Length:

790

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTGCGTAAG

5'SS Class:

major

3'SS Sequence:

TGCTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAC

U12 Branch Point Sequence:

TGCACCAGAACT

Flanking Amino Acid:

FTADTFGIDTTSCLPFMTNY

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.6

0.37

1.3

65.1

42.5

Major BPS

64.9

0.37

0.9

55.4

32.3

Major PPT

84.3

0.77

0.8

76.4

37.7

Minor 5ss

29.9

-2.3

2.8

31.8

35.6

Minor BPS

51.9

0.14

1.8

71.98

Associated Gene:

Gene:

ASH2L

Ensembl Gene ID:

ENSAPLG00000015588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048141

4182805 - 4191869

9065

ENSAPLT00000016272

4182805 - 4191285

8481