Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_4189841_4190167_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4189841 - 4190167

Intron Length:

327

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTACTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTCATTTTACT

Flanking Amino Acid:

KSLKQAPGSQIIFFKNGVSQ

Intron Amino Acid Position:

527

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.1

1.11

0.7

89.3

17.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.92

0.7

27.5

Minor 5ss

39.5

-1.2

2.8

47.2

Minor BPS

0.21

1.8

74.47

42.1

Associated Gene:

Gene:

ASH2L

Ensembl Gene ID:

ENSAPLG00000015588

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048141

4182805 - 4191869

9065

ENSAPLT00000016272

4182805 - 4191285

8481