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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4199480_4199550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4199480 - 4199550

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGGCCG

5'SS Class:

major

3'SS Sequence:

CGCCCTGCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

GGGTGCTGACCC

Flanking Amino Acid:

RILGKGGFGEVCACQVRATG

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

54.2

44.5

Major BPS

66.3

0.4

1.1

41.8

Major PPT

62.8

0.29

0.9

52.9

36.7

Minor 5ss

24.6

-2.9

3.2

30.3

42.9

Minor BPS

44.2

-0.4

2.1

52.7

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043875

4196539 - 4202201

5663

ENSAPLT00000043391

4197539 - 4202201

4663