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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4199615_4199705_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4199615 - 4199705

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGGG

5'SS Class:

strong_major

3'SS Sequence:

GGCCGTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACACAT

U12 Branch Point Sequence:

CTGGCACCAAGC

Flanking Amino Acid:

DRFLQWKYLERQSVTKDTFR

Intron Amino Acid Position:

339

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

65.9

40.1

Major BPS

52.1

0.05

1.2

37.5

Major PPT

65.1

0.34

56.7

43.3

Minor 5ss

24.4

-2.9

3.1

29.4

43.3

Minor BPS

36.3

-1

2.1

44.07

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043391

4197539 - 4202201

4663

ENSAPLT00000043875

4196539 - 4202201

5663