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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4199799_4199900_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4199799 - 4199900

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

GGTGTCCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

GTGTCCCCACAG

Flanking Amino Acid:

PCKELFSSCLHPLRQYLSRA

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

59.9

39.3

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

66.4

0.37

0.9

57.9

38.6

Minor 5ss

32.2

-2

2.9

42.7

37.7

Minor BPS

40.6

-0.8

2.1

46.68

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026406

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043875

4196539 - 4202201

5663

ENSAPLT00000043391

4197539 - 4202201

4663