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Intron Name: Anas_platyrhynchos_platyrhynchos_23_42116_42214_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

42116 - 42214

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGACTGAG

5'SS Class:

major

3'SS Sequence:

GTTTGCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

GGTGCTTGAACT

Flanking Amino Acid:

GFLYLRATPQRCLERLWRRA

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.64

1.1

68.4

38.7

Major BPS

0.65

1.5

85.7

34.9

Major PPT

80.8

0.69

0.9

73.7

36.9

Minor 5ss

32.1

-2

3.1

39.6

46.4

Minor BPS

60.5

0.41

1.6

74.46

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006237

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040511

40973 - 42677

1705