Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_4219745_4220757_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4219745 - 4220757

Intron Length:

1013

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGAGCTTG

5'SS Class:

major

3'SS Sequence:

TGTTTATCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

GCATCCTGACCT

Flanking Amino Acid:

VENIAVEIPNGEPLQIDHLV

Intron Amino Acid Position:

198

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

66.1

42.1

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

79.3

0.66

0.8

74.1

35.6

Minor 5ss

42.5

-0.8

56.3

47.9

Minor BPS

55.5

0.25

1.8

70.66

45.6

Associated Gene:

Gene:

DDHD2

Ensembl Gene ID:

ENSAPLG00000014268

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014883

4217383 - 4224744

7362