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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4239657_4240523_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4239657 - 4240523

Intron Length:

867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGAGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCACCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCCAC

U12 Branch Point Sequence:

TCCCCTTCCACC

Flanking Amino Acid:

LCLNLTQPPFGKWECPWHQC

Intron Amino Acid Position:

406

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.8

0.9

74.3

34.1

Major BPS

55.1

0.13

1.3

67.8

38.2

Major PPT

73.8

0.54

0.8

70.2

29.4

Minor 5ss

33.2

-1.9

3.4

45.7

43.4

Minor BPS

46.2

-0.3

1.9

55.34

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000013728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014336

4239415 - 4245288

5874