Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_4260780_4261547_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4260780 - 4261547

Intron Length:

768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGGTGA

5'SS Class:

major

3'SS Sequence:

TTTGTTCCTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TTCAGTGTAATT

Flanking Amino Acid:

QASNHSEKQKIRKPRPQRER

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

66.8

41.3

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

76.2

0.59

80.3

32.2

Minor 5ss

-1.7

3.4

47.2

48.2

Minor BPS

45.6

-0.2

2.3

67.54

44.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047112

4259264 - 4266470

7207

ENSAPLT00000034817

4259264 - 4266470

7207