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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4262293_4265653_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4262293 - 4265653

Intron Length:

3361

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTAAG

U12 Branch Point Sequence:

GGCTGCTAAGCT

Flanking Amino Acid:

IPKLEPEEQNVQQFLPSLPT

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

74.4

36.1

Major BPS

55.4

0.13

1.6

63.6

42.5

Major PPT

85.1

0.79

0.7

81.4

30.6

Minor 5ss

34.5

-1.8

3.3

44.7

43.5

Minor BPS

44.3

-0.3

2.2

61.14

48.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019197

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047112

4259264 - 4266470

7207