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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4282783_4283492_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4282783 - 4283492

Intron Length:
710

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGGATG

5'SS Class:
major

3'SS Sequence:
CCGGCCCCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGGTGAG

U12 Branch Point Sequence:
CCATGGTGAGGT

Flanking Amino Acid:
INHTYQLDVVERSPHRPILQ

Intron Amino Acid Position:
247

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.3
0.64
1
69.5
42.7

Major BPS
46.9
-0.1
1.7
42.8
49.4

Major PPT
66.3
0.37
0.9
58
33.2

Minor 5ss
30
-2.3
3.2
31.4
42.6

Minor BPS
32.1
-1.2
2.4
44.76
46

Associated Gene:

Gene:
FGFR1

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4276848 - 4293704
16857