Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_435351_435755_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

435351 - 435755

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGCTATC

5'SS Class:

major

3'SS Sequence:

TGGTGATGCTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCTTTCTTCATA

Flanking Amino Acid:

RLEYRGYDSAGVGIDGGNDK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

1.2

76.2

39.9

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

57.6

0.17

54.9

44.9

Minor 5ss

44.4

-0.6

62.6

42.2

Minor BPS

64.5

0.45

1.7

74.1

38.6

Associated Gene:

Gene:

GFPT1

Ensembl Gene ID:

ENSAPLG00000000806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043804

426624 - 468100

41477

ENSAPLT00000036978

426624 - 457293

30670

ENSAPLT00000018524

426624 - 457293

30670

ENSAPLT00000001166

432527 - 457207

24681