Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_438452_439621_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

438452 - 439621

Intron Length:

1170

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

GCTGTGGCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACCAA

U12 Branch Point Sequence:

GGTTACCAAACG

Flanking Amino Acid:

TNYKDLQKFLESKGYDFESE

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.5

41.3

Major BPS

56.4

0.16

1.3

67.1

39.2

Major PPT

65.8

0.36

56.9

43.5

Minor 5ss

29.8

-2.3

2.6

30.3

36.7

Minor BPS

45.2

-0.5

2.2

55.09

45.2

Associated Gene:

Gene:

GFPT1

Ensembl Gene ID:

ENSAPLG00000000806

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018524

426624 - 457293

30670

ENSAPLT00000001166

432527 - 457207

24681

ENSAPLT00000043804

426624 - 468100

41477

ENSAPLT00000036978

426624 - 457293

30670