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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4409127_4409249_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4409127 - 4409249

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCCTC

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGGTGAA

U12 Branch Point Sequence:

GTGCCTTTGCCT

Flanking Amino Acid:

LVALSTCSGLSGVLQLANTS

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.92

0.9

76.2

39.9

Major BPS

56.9

0.17

1.3

49.1

46.3

Major PPT

83.5

0.75

0.8

77.1

31.6

Minor 5ss

42.4

-0.8

3.1

59.1

45.6

Minor BPS

43.1

-0.4

3.4

68.99

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006313

4408056 - 4415318

7263