Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_4411193_4411289_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4411193 - 4411289

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGGCTC

5'SS Class:

major

3'SS Sequence:

CTCTGGCTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCCCAT

U12 Branch Point Sequence:

TCTGGCTTACAG

Flanking Amino Acid:

GAACIMQPSAVHSAGTKAFS

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.2

60.8

Major BPS

57.1

0.18

1.4

66.4

42.2

Major PPT

75.7

0.58

0.9

67.8

37.8

Minor 5ss

37.3

-1.4

3.5

51.7

Minor BPS

44.3

-0.5

2.2

51.73

48.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006313

4408056 - 4415318

7263