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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4412419_4412718_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4412419 - 4412718

Intron Length:

300

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TATGTGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAGTGAT

U12 Branch Point Sequence:

CAGTCTGTGAGT

Flanking Amino Acid:

DKQCQDIFGKGAKNGPLACY

Intron Amino Acid Position:

513

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

55.7

0.14

1.4

49.1

46.3

Major PPT

79.7

0.67

0.9

73.2

41.7

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

44.1

-0.3

2.2

58.72

45.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006313

4408056 - 4415318

7263