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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4412825_4413135_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4412825 - 4413135

Intron Length:

311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGCGCCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTGAA

U12 Branch Point Sequence:

CTTGTGTGAAGT

Flanking Amino Acid:

NHSGYQSCAWKDLQCGKLIC

Intron Amino Acid Position:

548

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

29.9

Major BPS

54.3

0.11

1.4

49.1

46.3

Major PPT

75.8

0.58

0.9

68.9

37.1

Minor 5ss

-1.5

3.3

50.9

39.6

Minor BPS

42.7

-0.4

2.4

63.41

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006066

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006313

4408056 - 4415318

7263