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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4417657_4418510_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4417657 - 4418510

Intron Length:

854

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAACAGC

5'SS Class:

major

3'SS Sequence:

GGCAGGGGGAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GATGCAG

U12 Branch Point Sequence:

GCAGGGGGAAAG

Flanking Amino Acid:

LANWRRKDPSGCCCPPCRNL

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.1

60.4

44.7

Major BPS

40.3

-0.6

1.7

49.1

46.3

Major PPT

40.8

-0.5

1.1

24.1

35.8

Minor 5ss

38.6

-1.3

2.9

43.3

44.3

Minor BPS

24.6

-2

2.3

22.39

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041188

4416113 - 4422417

6305

ENSAPLT00000006318

4416113 - 4422417

6305