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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4417979_4418531_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4417979 - 4418531

Intron Length:

553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

GCCCGCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGGGAAA

U12 Branch Point Sequence:

GCAGGGGGAAAG

Flanking Amino Acid:

RKDPSGPLEIENLDPIISLP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

37.1

-0.8

1.4

33.1

41.3

Major PPT

66.3

0.37

0.9

57.6

33.3

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

24.6

-2

2.3

22.39

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024856

4417272 - 4422417

5146