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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4418950_4419051_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4418950 - 4419051

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGCTGGGG

5'SS Class:

weak_major

3'SS Sequence:

AATTTCCTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCCAAT

U12 Branch Point Sequence:

TCCGATCCAATT

Flanking Amino Acid:

AIGAMAALRQYYVDPAVFYA

Intron Amino Acid Position:

194

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.7

0.02

1.1

40.8

39.7

Major BPS

0.32

1.2

70.7

33.4

Major PPT

71.7

0.49

0.8

63.3

38.5

Minor 5ss

24.6

-2.9

3.6

32.1

Minor BPS

-0.6

1.9

53.01

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039843

4416113 - 4422417

6305

ENSAPLT00000006318

4416113 - 4422417

6305