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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4419104_4420483_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4419104 - 4420483

Intron Length:

1380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GTGCCTGGCTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAG

U12 Branch Point Sequence:

CCTTCCTGAGCA

Flanking Amino Acid:

FYAVIRIFLSGWKDNPAMPD

Intron Amino Acid Position:

211

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

77.8

38.7

Major BPS

54.8

0.12

1.6

53.3

44.2

Major PPT

60.3

0.23

1.1

57.2

43.2

Minor 5ss

33.5

-1.9

2.8

34.2

41.4

Minor BPS

58.4

0.26

1.8

68.12

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006102

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039843

4416113 - 4422417

6305

ENSAPLT00000024856

4417272 - 4422417

5146

ENSAPLT00000006318

4416113 - 4422417

6305