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Intron Name: Anas_platyrhynchos_platyrhynchos_23_448949_450060_F


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
448949 - 450060

Intron Length:
1112

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCA|GTAAGTGGT

5'SS Class:
major

3'SS Sequence:
CATCTTTTACCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTAAAT

U12 Branch Point Sequence:
TAATATGTAACT

Flanking Amino Acid:
CGTSYHAGVATRQVLEELTE

Intron Amino Acid Position:
433

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.2
0.62
1
70.3
40.5

Major BPS
82.3
0.8
0.9
87.6
25.7

Major PPT
76.4
0.59
0.9
69.9
39.9

Minor 5ss
36.6
-1.5
3.4
54.8
43.5

Minor BPS
52.1
0.14
2.2
75.03
41.4

Associated Gene:

Gene:
GFPT1

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

426624 - 457293
30670

432527 - 457207
24681

426624 - 468100
41477

426624 - 457293
30670