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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4492514_4493088_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4492514 - 4493088

Intron Length:

575

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTGTGTTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATAACAA

U12 Branch Point Sequence:

GTGAGAGTGACT

Flanking Amino Acid:

TKIKLSPFPLNLKNQ*

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

80.4

26.8

Major BPS

0.08

61.4

34.3

Major PPT

77.9

0.63

0.9

71.9

Minor 5ss

33.7

-1.9

3.2

40.3

40.1

Minor BPS

38.7

-0.8

2.5

57.63

Associated Gene:

Gene:

ZMAT4

Ensembl Gene ID:

ENSAPLG00000006106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006326

4492498 - 4547985

55488