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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4508379_4513256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4508379 - 4513256

Intron Length:

4878

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTCCCTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

TAACCCCCGAGT

Flanking Amino Acid:

LGEPPALKAAETTLSSLKQP

Intron Amino Acid Position:

117

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

85.2

0.79

0.7

80.4

24.9

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

42.5

-0.5

2.1

59.96

42.9

Associated Gene:

Gene:

ZMAT4

Ensembl Gene ID:

ENSAPLG00000006106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036797

4492498 - 4541266

48769

ENSAPLT00000023409

4499663 - 4547985

48323

ENSAPLT00000006326

4492498 - 4547985

55488