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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4519274_4531501_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4519274 - 4531501

Intron Length:

12228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TGTAACTTCATT

Flanking Amino Acid:

SESQRVAHYESRKHASKVRL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.9

Major BPS

78.6

0.71

79.6

32.9

Major PPT

94.6

0.6

88.2

29.1

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

52.3

0.15

74.64

Associated Gene:

Gene:

ZMAT4

Ensembl Gene ID:

ENSAPLG00000006106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036797

4492498 - 4541266

48769

ENSAPLT00000023409

4499663 - 4547985

48323

ENSAPLT00000006326

4492498 - 4547985

55488