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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4531604_4547242_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4531604 - 4547242

Intron Length:

15639

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACTGCCC

5'SS Class:

major

3'SS Sequence:

TTGCTGTGAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAA

U12 Branch Point Sequence:

TTGCTGTGAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.6

0.42

1.1

54.4

42.9

Major BPS

68.7

0.47

0.9

67.9

Major PPT

65.6

0.35

1.1

61.5

43.5

Minor 5ss

-2.2

3.4

43.3

43.9

Minor BPS

48.4

-0.1

2.1

65.21

41.1

Associated Gene:

Gene:

ZMAT4

Ensembl Gene ID:

ENSAPLG00000006106

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023409

4499663 - 4547985

48323

ENSAPLT00000006326

4492498 - 4547985

55488