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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4589052_4592478_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4589052 - 4592478

Intron Length:

3427

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCAT

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCTCACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

TGCTCCTCATCA

Flanking Amino Acid:

PNATEVSRPKGTTVCPPCDN

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.6

37.2

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

72.9

0.52

0.9

66.1

34.5

Minor 5ss

32.4

-2

3.4

46.7

48.6

Minor BPS

56.8

0.21

1.9

68.51

43.6

Associated Gene:

Gene:

SFRP1

Ensembl Gene ID:

ENSAPLG00000006111

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006335

4578097 - 4593101

15005