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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4612834_4613606_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

4612834 - 4613606

Intron Length:

773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTAGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TAATATTAAACT

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.9

91.1

28.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

84.4

0.77

0.8

81.8

28.6

Minor 5ss

40.6

-1.1

3.1

59.8

44.7

Minor BPS

56.6

0.29

1.8

75.03

41.4

Associated Gene:

Gene:

GOLGA7

Ensembl Gene ID:

ENSAPLG00000028662

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035544

4609828 - 4614325

4498