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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4629361_4632182_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4629361 - 4632182

Intron Length:

2822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTCTTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

GCAGTCTTGATT

Flanking Amino Acid:

YMKTLLKIFQWATLRIERGA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.8

81.8

38.5

Major BPS

83.8

0.84

73.6

41.8

Major PPT

79.7

0.67

0.9

73.4

Minor 5ss

35.9

-1.6

50.5

45.8

Minor BPS

54.2

0.21

1.4

63.3

41.6

Associated Gene:

Gene:

GPAT4

Ensembl Gene ID:

ENSAPLG00000006157

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021773

4628463 - 4636972

8510

ENSAPLT00000006399

4628463 - 4646179

17717