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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4641992_4642072_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4641992 - 4642072

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCATG

5'SS Class:

strong_major

3'SS Sequence:

CATGGGGCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTAAC

U12 Branch Point Sequence:

TGGCCACTAACA

Flanking Amino Acid:

SLGMTESQVKVWFQNRRTKW

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.8

38.7

Major BPS

64.5

0.36

65.2

28.2

Major PPT

1.1

42.5

42.9

Minor 5ss

37.5

-1.4

47.8

47.9

Minor BPS

49.2

-0

64.22

41.2

Associated Gene:

Gene:

NKX6-3

Ensembl Gene ID:

ENSAPLG00000026367

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043137

4641223 - 4643832

2610