Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_4653572_4653766_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4653572 - 4653766

Intron Length:

195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

GCTTCCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

TGTGGCTGACGC

Flanking Amino Acid:

WVSREGKSVKMESLYTALRN

Intron Amino Acid Position:

1503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.4

0.57

35.1

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

80.1

0.68

0.8

73.3

31.6

Minor 5ss

36.1

-1.6

2.8

42.3

38.4

Minor BPS

39.5

-0.8

2.3

51.35

45.6

Associated Gene:

Gene:

ANK1

Ensembl Gene ID:

ENSAPLG00000006189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027701

4650263 - 4681369

31107

ENSAPLT00000006487

4650263 - 4675945

25683