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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4654537_4654783_R


Intron Information:

Intron Rank:
35

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
4654537 - 4654783

Intron Length:
247

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCG|GTACGCAGC

5'SS Class:
major

3'SS Sequence:
TCTTCTCCTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGTGAC

U12 Branch Point Sequence:
GGAGTTGTGACT

Flanking Amino Acid:
RYSILSESSFGSLSSTDRAD

Intron Amino Acid Position:
1434

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
70.1
0.47
1.1
58.5
46.4

Major BPS
71.3
0.53
1.2
63.1
44.5

Major PPT
85.5
0.8
0.7
77.5
31.3

Minor 5ss
39.1
-1.2
3.1
52.2
44.9

Minor BPS
43.2
-0.4
2
56.03
40.6

Associated Gene:

Gene:
ANK1

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4650263 - 4681369
31107

4650263 - 4675945
25683