Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_4655123_4655209_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4655123 - 4655209

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGGCA

5'SS Class:

major

3'SS Sequence:

TCTTGGTGCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCCCAT

U12 Branch Point Sequence:

GCCCCACTACCC

Flanking Amino Acid:

RENRLVISIKVRDSSREASG

Intron Amino Acid Position:

1366

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

68.6

36.2

Major BPS

46.8

-0.2

1.4

54.3

42.9

Major PPT

69.9

0.45

64.5

41.4

Minor 5ss

29.6

-2.3

3.4

39.3

Minor BPS

40.3

-0.7

46.58

Associated Gene:

Gene:

ANK1

Ensembl Gene ID:

ENSAPLG00000006189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027701

4650263 - 4681369

31107

ENSAPLT00000006487

4650263 - 4675945

25683