Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_4660328_4660431_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4660328 - 4660431

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAGGAAGT

5'SS Class:

major

3'SS Sequence:

CTGCCTTGCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

CTGCCTTGCACA

Flanking Amino Acid:

HGASPNEISTNGTTPLAIAK

Intron Amino Acid Position:

770

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

66.8

44.6

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

68.8

0.42

63.6

36.9

Minor 5ss

34.3

-1.8

3.3

49.4

46.6

Minor BPS

46.5

-0.2

1.9

57.13

42.5

Associated Gene:

Gene:

ANK1

Ensembl Gene ID:

ENSAPLG00000006189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006487

4650263 - 4675945

25683

ENSAPLT00000027701

4650263 - 4681369

31107