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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4663036_4663122_R


Intron Information:

Intron Rank:
15

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4663036 - 4663122

Intron Length:
87

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGGGTT

5'SS Class:
strong_major

3'SS Sequence:
TCCCCCTCTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCTCAC

U12 Branch Point Sequence:
TCTGTCTCACCA

Flanking Amino Acid:
RDAHPNAAGKNGLTPLHVAV

Intron Amino Acid Position:
572

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.8
0.89
0.8
82
31

Major BPS
67.3
0.43
1.2
71.3
36.7

Major PPT
78.6
0.64
0.7
72.5
25.6

Minor 5ss
29.7
-2.3
3.7
45.9
49.3

Minor BPS
48.5
-0.1
1.9
62.43
44.3

Associated Gene:

Gene:
ANK1

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4650263 - 4681369
31107

4650263 - 4675945
25683