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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4663222_4663399_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4663222 - 4663399

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTGC

5'SS Class:

major

3'SS Sequence:

CCTTTCTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

CATCCCTGTACA

Flanking Amino Acid:

KGASQTCMTKKGFTPLHVAA

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

64.1

43.4

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

82.2

0.72

0.7

80.4

24.9

Minor 5ss

42.8

-0.8

3.2

58.8

46.1

Minor BPS

50.8

0.02

1.8

63.14

42.6

Associated Gene:

Gene:

ANK1

Ensembl Gene ID:

ENSAPLG00000006189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006487

4650263 - 4675945

25683

ENSAPLT00000027701

4650263 - 4681369

31107