Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_4665017_4665445_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4665017 - 4665445

Intron Length:

429

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCCCATG

5'SS Class:

major

3'SS Sequence:

TCCACGGTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

CCTTGCTCCACG

Flanking Amino Acid:

HGAPIQAKTKNGLSPIHMAA

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.2

0.31

1.2

59.9

46.4

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

63.6

0.31

55.7

38.8

Minor 5ss

-0.9

3.1

47.3

Minor BPS

43.5

-0.6

2.4

50.75

49.3

Associated Gene:

Gene:

ANK1

Ensembl Gene ID:

ENSAPLG00000006189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006487

4650263 - 4675945

25683

ENSAPLT00000027701

4650263 - 4681369

31107