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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4669019_4673880_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4669019 - 4673880

Intron Length:
4862

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAGGTGAA

5'SS Class:
strong_major

3'SS Sequence:
TTGCTCCCTCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GACTAAT

U12 Branch Point Sequence:
CCTCTCCTACCT

Flanking Amino Acid:
NGVDINTCNQNGLNALHLAS

Intron Amino Acid Position:
48

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.4
0.86
0.9
77.6
32.8

Major BPS
69
0.47
1.2
69.9
35.3

Major PPT
79.2
0.66
0.8
70.3
36.3

Minor 5ss
30.6
-2.2
3.4
39.4
46.5

Minor BPS
47.1
-0.1
2
65.17
45.4

Associated Gene:

Gene:
ANK1

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4650263 - 4675945
25683