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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4673983_4675906_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4673983 - 4675906

Intron Length:
1924

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTGAGTATA

5'SS Class:
major

3'SS Sequence:
TTCTTTCCCAAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCCTCAT

U12 Branch Point Sequence:
TCTTTCCCAAAG

Flanking Amino Acid:
RKGRSRPDVAADAATSFLRA

Intron Amino Acid Position:
14

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.5
0.55
1.1
76.5
34

Major BPS
64.6
0.36
1.3
67.6
40.6

Major PPT
73.1
0.52
1
74.8
27.9

Minor 5ss
36.8
-1.5
2.9
52.2
44.4

Minor BPS
46.9
-0.3
2
57.32
43.9

Associated Gene:

Gene:
ANK1

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4650263 - 4675945
25683