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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4729204_4729787_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4729204 - 4729787

Intron Length:
584

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAGTTAA

5'SS Class:
strong_major

3'SS Sequence:
TCGTTTTTGTAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTGAG

U12 Branch Point Sequence:
TTGAGTGTAACA

Flanking Amino Acid:
YRKNNISVFEVDGNVSTIYC

Intron Amino Acid Position:
580

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.1
1.11
0.7
89.3
17.5

Major BPS
64.6
0.36
1.5
63.4
44.3

Major PPT
67.8
0.4
1.2
74.9
39

Minor 5ss
39.5
-1.2
2.8
49
47.2

Minor BPS
46.2
-0.2
2.3
63.27
43.5

Associated Gene:

Gene:
KAT6A

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4716474 - 4753980
37507