About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_4736630_4736876_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
4736630 - 4736876

Intron Length:
247

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTGAGTACA

5'SS Class:
major

3'SS Sequence:
CTGTCTTCAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTTAAA

U12 Branch Point Sequence:
CTGTCTTCAACA

Flanking Amino Acid:
SSCRDQGKNADNMLFCDSCD

Intron Amino Acid Position:
277

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.6
0.51
1.1
70.1
35.6

Major BPS
81.6
0.78
0.8
82
24.9

Major PPT
73.8
0.54
0.9
69.6
35.5

Minor 5ss
33.5
-1.9
2.7
44.7
42.7

Minor BPS
64.9
0.46
1.6
71.13
41.5

Associated Gene:

Gene:
KAT6A

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

4716474 - 4753980
37507