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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4764982_4768787_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

4764982 - 4768787

Intron Length:

3806

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

GTATAAACGCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

ATTTGTATAAAC

Flanking Amino Acid:

QFKIQQLAISGMSLRPQPIP

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.6

30.7

Major BPS

77.7

0.69

83.3

27.7

Major PPT

54.6

0.1

1.1

45.3

45.5

Minor 5ss

33.1

-1.9

3.2

40.3

40.2

Minor BPS

48.8

-0.1

2.1

66.93

38.4

Associated Gene:

Gene:

AP3M2

Ensembl Gene ID:

ENSAPLG00000006314

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031697

4758981 - 4771712

12732

ENSAPLT00000006554

4758981 - 4781263

22283

ENSAPLT00000033805

4758981 - 4769765

10785