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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4782775_4782858_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4782775 - 4782858

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCGCC

5'SS Class:

major

3'SS Sequence:

GCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

CCGCGCTGAGCC

Flanking Amino Acid:

FGNVIRWHNKESGEQLAIKQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

68.2

38.6

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

36.2

-1.6

3.5

50.4

46.4

Minor BPS

40.8

-0.7

44.23

43.7

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589