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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4782954_4783546_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4782954 - 4783546

Intron Length:

593

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCGG

5'SS Class:

strong_major

3'SS Sequence:

TTCCATTCCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATCAC

U12 Branch Point Sequence:

ATCACCTGTACT

Flanking Amino Acid:

RWALEIQIMKRLNHPNVVAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

60.4

45.8

Major BPS

63.2

0.33

1.2

65.7

Major PPT

78.7

0.65

0.8

76.7

31.6

Minor 5ss

24.7

-2.9

29.5

43.3

Minor BPS

52.8

0.17

1.9

72.26

43.9

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589