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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4783665_4784458_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4783665 - 4784458

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGTCA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTATAT

U12 Branch Point Sequence:

GAGACTATATTC

Flanking Amino Acid:

EYCQGGDLRKYLNQLENCCG

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.9

74.5

31.6

Major BPS

57.9

0.2

1.1

40.4

Major PPT

90.7

0.92

0.7

88.9

28.1

Minor 5ss

31.6

-2.1

3.2

38.8

46.5

Minor BPS

42.5

-0.5

1.7

45.87

36.6

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589