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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4786295_4786779_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4786295 - 4786779

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGCAGG

5'SS Class:

major

3'SS Sequence:

TTTTGTGTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTTAT

U12 Branch Point Sequence:

GTGTCCTTATTC

Flanking Amino Acid:

NIVLQQGEQRLIHKIIDLGY

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.6

48.1

Major BPS

78.8

0.72

67.9

40.1

Major PPT

86.8

0.83

0.9

84.6

Minor 5ss

38.3

-1.3

2.8

40.5

45.4

Minor BPS

65.7

0.47

1.6

70.95

40.8

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589