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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4787661_4787968_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4787661 - 4787968

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

TTCGGTCCTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TCTCCTCTGATC

Flanking Amino Acid:

SSLPCPNNLNSVLAARLEKW

Intron Amino Acid Position:

267

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.98

0.8

85.2

31.7

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

77.3

0.61

0.9

73.6

37.1

Minor 5ss

34.9

-1.7

3.2

49.5

46.5

Minor BPS

50.9

0.01

1.6

63.48

36.5

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589