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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4788099_4788503_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4788099 - 4788503

Intron Length:

405

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGAT

5'SS Class:

strong_major

3'SS Sequence:

ATTCCTCTTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

GTCACATTATTC

Flanking Amino Acid:

KALDDILNLKLLHVLNMVTG

Intron Amino Acid Position:

311

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

77.5

32.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

79.4

0.66

0.8

74.2

30.2

Minor 5ss

32.6

-2

3.4

45.9

49.3

Minor BPS

47.3

-0.2

1.9

57.05

41.5

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589