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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4788699_4788930_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4788699 - 4788930

Intron Length:

232

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCATG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAG

U12 Branch Point Sequence:

TCTTAGAGAACT

Flanking Amino Acid:

LATKHIADSKVNDAADADLL

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

77.8

38.7

Major BPS

67.5

0.43

1.5

65.7

43.2

Major PPT

85.3

0.79

0.8

80.7

31.4

Minor 5ss

37.5

-1.4

47.8

47.9

Minor BPS

44.2

-0.3

2.4

70.95

45.3

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589