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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4789529_4789781_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4789529 - 4789781

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTATGGTGG

5'SS Class:

major

3'SS Sequence:

CTTGTCCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAG

U12 Branch Point Sequence:

TTCTTGTCCACA

Flanking Amino Acid:

NRLQQGQRAAMMNLLRYNST

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.1

43.5

Major BPS

58.8

0.22

1.6

Major PPT

71.5

0.48

0.9

65.4

35.3

Minor 5ss

44.6

-0.6

3.1

59.1

Minor BPS

43.8

-0.5

2.5

62.43

44.3

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589